NeedlemanWunschLinearSpaceAffine
public interface PairwiseAligner
Modifier and Type | Interface | Description |
---|---|---|
static class |
PairwiseAligner.Result |
Modifier and Type | Method | Description |
---|---|---|
PairwiseAligner.Result |
doAlignment(Sequence seq1,
Sequence seq2,
ProgressListener progress) |
|
double |
getScore(Sequence seq1,
Sequence seq2) |
PairwiseAligner.Result doAlignment(Sequence seq1, Sequence seq2, ProgressListener progress)
http://code.google.com/p/jebl2/